TopFIND 4.0

Q9FVC1: MADS-box protein SVP {ECO:0000303|PubMed:10758486}

General Information

Protein names
- MADS-box protein SVP {ECO:0000303|PubMed:10758486}
- Protein SHORT VEGETATIVE PHASE {ECO:0000303|PubMed:10758486}
Gene names SVP
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9FVC1

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS 
        70         80         90        100        110        120 
SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE IADKSHRLRQ MRGEELQGLD 
       130        140        150        160        170        180 
IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER 
       190        200        210        220        230        240 
LGMQICNNVH AHGGAESENA AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG 
   

Isoforms

- Isoform 2 of MADS-box protein SVP - Isoform 3 of MADS-box protein SVP

Sequence View

        10         20         30         40         50         60 
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS 
        70         80         90        100        110        120 
SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE IADKSHRLRQ MRGEELQGLD 
       130        140        150        160        170        180 
IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER 
       190        200        210        220        230        240 
LGMQICNNVH AHGGAESENA AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG 
   
        10         20         30         40         50         60 
MAREKIQIRK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEFCSS 
        70         80         90        100        110        120 
SMKEVLERHN LQSKNLEKLD QPSLELQLVE NSDHARMSKE IADKSHRLRQ MRGEELQGLD 
       130        140        150        160        170        180 
IEELQQLEKA LETGLTRVIE TKSDKIMSEI SELQKKGMQL MDENKRLRQQ GTQLTEENER 
       190        200        210        220        230        240 
LGMQICNNVH AHGGAESENA AVYEEGQSSE SITNAGNSTG APVDSESSDT SLRLGLPYGG 
   



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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9FVC1-1-unknown MAREKI... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9FVC1-1-unknown MAREKI... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt91138
    Q9FVC1-1-unknown MAREKI... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt91139

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...LPYGG 240 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...LPYGG 240 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt86757

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)