TopFIND 4.0

Q9LIA4: Protein RIK

General Information

Protein names
- Protein RIK
- Rough sheath 2-interacting KH domain protein
- RS2-interacting KH domain protein
Gene names RIK
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9LIA4

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MTEDNDEARV PLSDSSTTND ASRTRQRRKR KWDKPAEQLV AAGVAFPQLL PLGNTMNVPS 
        70         80         90        100        110        120 
MSPLLQTLSV PLAVPKVNQP KIQDEVIIAR EIVINDAEAS LRHRLTKRST QEDIQRSTGA 
       130        140        150        160        170        180 
VVITRGKYRP PNAPPDGEKP LYLHISAAAQ LQLKETTERI LAVDRAAAMI EEMMKQKSIS 
       190        200        210        220        230        240 
QIGSVGLQTV KMLSTCVYLG FEADPSSNVA ARIRGPNDQY INHIMNETGA TVVLRGRGSG 
       250        260        270        280        290        300 
SLENQHGDEA QLPLHLLLSG SNPKSIDDAK RLAENLMDTI SVEFGASRVS SSKVYGAVPP 
       310        320        330        340        350        360 
PQQLISGAPG SDQENQNLIS TYGLMTSIPI TAPPYAVSSF PVTPATSLYP QFPVMQSLGI 
       370        380        390        400        410        420 
SNGGPSQPVA GGTSYSGYAG IYPQATPLQQ VAQVLKQSIS PVISTVPPTM LTATSLSIPS 
       430        440        450        460        470        480 
DNASNEMERR PPRKRKFQEL PADCKVPEKD KQQSELAMTG DVTPSANRVR SPPSPRSVMP 
       490        500        510        520        530        540 
PPPPKTIAPP PSKTMSPPSS KSMLPPPPRS KTMSPLSSKS MLPPPPRFTL TTQRSRLQDN 
       550        560        570    
HISVKKPNPV PDTLIKLMEY GDDEDDDDDP DEPLTTRS

Isoforms

- Isoform 2 of Protein RIK

Sequence View

        10         20         30         40         50         60 
MTEDNDEARV PLSDSSTTND ASRTRQRRKR KWDKPAEQLV AAGVAFPQLL PLGNTMNVPS 
        70         80         90        100        110        120 
MSPLLQTLSV PLAVPKVNQP KIQDEVIIAR EIVINDAEAS LRHRLTKRST QEDIQRSTGA 
       130        140        150        160        170        180 
VVITRGKYRP PNAPPDGEKP LYLHISAAAQ LQLKETTERI LAVDRAAAMI EEMMKQKSIS 
       190        200        210        220        230        240 
QIGSVGLQTV KMLSTCVYLG FEADPSSNVA ARIRGPNDQY INHIMNETGA TVVLRGRGSG 
       250        260        270        280        290        300 
SLENQHGDEA QLPLHLLLSG SNPKSIDDAK RLAENLMDTI SVEFGASRVS SSKVYGAVPP 
       310        320        330        340        350        360 
PQQLISGAPG SDQENQNLIS TYGLMTSIPI TAPPYAVSSF PVTPATSLYP QFPVMQSLGI 
       370        380        390        400        410        420 
SNGGPSQPVA GGTSYSGYAG IYPQATPLQQ VAQVLKQSIS PVISTVPPTM LTATSLSIPS 
       430        440        450        460        470        480 
DNASNEMERR PPRKRKFQEL PADCKVPEKD KQQSELAMTG DVTPSANRVR SPPSPRSVMP 
       490        500        510        520        530        540 
PPPPKTIAPP PSKTMSPPSS KSMLPPPPRS KTMSPLSSKS MLPPPPRFTL TTQRSRLQDN 
       550        560        570    
HISVKKPNPV PDTLIKLMEY GDDEDDDDDP DEPLTTRS



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Directness:


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Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


Database:


Lab:



Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9LIA4-1-unknown MTEDND... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9LIA4-277-unknown MDTISV... 277 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt87727

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...LTTRS 578 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...LTTRS 578 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt83345

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)