TopFIND 4.0

Q9LKR8: Rubisco accumulation factor 1.1, chloroplastic {ECO:0000303|PubMed:22942379}

General Information

Protein names
- Rubisco accumulation factor 1.1, chloroplastic {ECO:0000303|PubMed:22942379}
Gene names RAF1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9LKR8

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MLSLTATTLS SSIFTQSKTH GFFNTRPVYR KPFTTITSAL IPASNRQAPP KQQLYQPFRP 
        70         80         90        100        110        120 
PPSPIPPKFR SLDTAGKIEV LADRLGLWFE YAPLISSLYT EGFTPPSIEE LTGISGVEQN 
       130        140        150        160        170        180 
SLIVGAQVRD SLVQSGAKPE LIAAFDTNGA ELLYEIRLLN TTQRVAAAEY IVDHGFDTKG 
       190        200        210        220        230        240 
AGDLARAIKD FPHRRGDVGL GDFDYNLPGD CLSFMLYRKS REHRSPSEIR TTLLEQALET 
       250        260        270        280        290        300 
AVTEKAKKAV LRELHGESEE ERVKEEEIKI IRVPVVRLRF GEVAGASSVV VLPVCKAEEG 
       310        320        330        340        350        360 
EEKLLEAPME FESGGEFGVV EAEKDWSRWV VLPGWDPVVA VRKGVAVSFS DDREVLPWNG 
       370        380        390        400        410        420 
KGEAIMVVID REKKTVEADN GYYYLVVADG GMKLDRGLVL KEKGVNESLG MVVLVVRPPR 
       430    
DDDDEWQIND EDWD

Isoforms

- Isoform 2 of Rubisco accumulation factor 1, chloroplastic - Isoform 2 of Rubisco accumulation factor 1.1, chloroplastic

Sequence View

        10         20         30         40         50         60 
MLSLTATTLS SSIFTQSKTH GFFNTRPVYR KPFTTITSAL IPASNRQAPP KQQLYQPFRP 
        70         80         90        100        110        120 
PPSPIPPKFR SLDTAGKIEV LADRLGLWFE YAPLISSLYT EGFTPPSIEE LTGISGVEQN 
       130        140        150        160        170        180 
SLIVGAQVRD SLVQSGAKPE LIAAFDTNGA ELLYEIRLLN TTQRVAAAEY IVDHGFDTKG 
       190        200        210        220        230        240 
AGDLARAIKD FPHRRGDVGL GDFDYNLPGD CLSFMLYRKS REHRSPSEIR TTLLEQALET 
       250        260        270        280        290        300 
AVTEKAKKAV LRELHGESEE ERVKEEEIKI IRVPVVRLRF GEVAGASSVV VLPVCKAEEG 
       310        320        330        340        350        360 
EEKLLEAPME FESGGEFGVV EAEKDWSRWV VLPGWDPVVA VRKGVAVSFS DDREVLPWNG 
       370        380        390        400        410        420 
KGEAIMVVID REKKTVEADN GYYYLVVADG GMKLDRGLVL KEKGVNESLG MVVLVVRPPR 
       430    
DDDDEWQIND EDWD         10         20         30         40         50         60 
MLSLTATTLS SSIFTQSKTH GFFNTRPVYR KPFTTITSAL IPASNRQAPP KQQLYQPFRP 
        70         80         90        100        110        120 
PPSPIPPKFR SLDTAGKIEV LADRLGLWFE YAPLISSLYT EGFTPPSIEE LTGISGVEQN 
       130        140        150        160        170        180 
SLIVGAQVRD SLVQSGAKPE LIAAFDTNGA ELLYEIRLLN TTQRVAAAEY IVDHGFDTKG 
       190        200        210        220        230        240 
AGDLARAIKD FPHRRGDVGL GDFDYNLPGD CLSFMLYRKS REHRSPSEIR TTLLEQALET 
       250        260        270        280        290        300 
AVTEKAKKAV LRELHGESEE ERVKEEEIKI IRVPVVRLRF GEVAGASSVV VLPVCKAEEG 
       310        320        330        340        350        360 
EEKLLEAPME FESGGEFGVV EAEKDWSRWV VLPGWDPVVA VRKGVAVSFS DDREVLPWNG 
       370        380        390        400        410        420 
KGEAIMVVID REKKTVEADN GYYYLVVADG GMKLDRGLVL KEKGVNESLG MVVLVVRPPR 
       430    
DDDDEWQIND EDWD



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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9LKR8-1-unknown MLSLTA... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt86919
    Q9LKR8-52-unknown QQLYQP... 52 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9LKR8-52-unknown QQLYQP... 52 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt115653

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...DEDWD 434 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)