TopFIND 4.0

Q9NSD5: Sodium- and chloride-dependent GABA transporter 2

General Information

Protein names
- Sodium- and chloride-dependent GABA transporter 2
- GAT-2
- Solute carrier family 6 member 13
Gene names SLC6A13
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q9NSD5

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MDSRVSGTTS NGETKPVYPV MEKKEEDGTL ERGHWNNKME FVLSVAGEII GLGNVWRFPY 
        70         80         90        100        110        120 
LCYKNGGGAF FIPYLVFLFT CGIPVFLLET ALGQYTSQGG VTAWRKICPI FEGIGYASQM 
       130        140        150        160        170        180 
IVILLNVYYI IVLAWALFYL FSSFTIDLPW GGCYHEWNTE HCMEFQKTNG SLNGTSENAT 
       190        200        210        220        230        240 
SPVIEFWERR VLKISDGIQH LGALRWELAL CLLLAWVICY FCIWKGVKST GKVVYFTATF 
       250        260        270        280        290        300 
PYLMLVVLLI RGVTLPGAAQ GIQFYLYPNL TRLWDPQVWM DAGTQIFFSF AICLGCLTAL 
       310        320        330        340        350        360 
GSYNKYHNNC YRDCIALCFL NSGTSFVAGF AIFSILGFMS QEQGVPISEV AESGPGLAFI 
       370        380        390        400        410        420 
AYPRAVVMLP FSPLWACCFF FMVVLLGLDS QFVCVESLVT ALVDMYPHVF RKKNRREVLI 
       430        440        450        460        470        480 
LGVSVVSFLV GLIMLTEGGM YVFQLFDYYA ASGMCLLFVA IFESLCVAWV YGAKRFYDNI 
       490        500        510        520        530        540 
EDMIGYRPWP LIKYCWLFLT PAVCTATFLF SLIKYTPLTY NKKYTYPWWG DALGWLLALS 
       550        560        570        580        590        600 
SMVCIPAWSL YRLGTLKGPF RERIRQLMCP AEDLPQRNPA GPSAPATPRT SLLRLTELES 
   
HC

Isoforms

- Isoform 2 of Sodium- and chloride-dependent GABA transporter 2 - Isoform 3 of Sodium- and chloride-dependent GABA transporter 2

Sequence View

        10         20         30         40         50         60 
MDSRVSGTTS NGETKPVYPV MEKKEEDGTL ERGHWNNKME FVLSVAGEII GLGNVWRFPY 
        70         80         90        100        110        120 
LCYKNGGGAF FIPYLVFLFT CGIPVFLLET ALGQYTSQGG VTAWRKICPI FEGIGYASQM 
       130        140        150        160        170        180 
IVILLNVYYI IVLAWALFYL FSSFTIDLPW GGCYHEWNTE HCMEFQKTNG SLNGTSENAT 
       190        200        210        220        230        240 
SPVIEFWERR VLKISDGIQH LGALRWELAL CLLLAWVICY FCIWKGVKST GKVVYFTATF 
       250        260        270        280        290        300 
PYLMLVVLLI RGVTLPGAAQ GIQFYLYPNL TRLWDPQVWM DAGTQIFFSF AICLGCLTAL 
       310        320        330        340        350        360 
GSYNKYHNNC YRDCIALCFL NSGTSFVAGF AIFSILGFMS QEQGVPISEV AESGPGLAFI 
       370        380        390        400        410        420 
AYPRAVVMLP FSPLWACCFF FMVVLLGLDS QFVCVESLVT ALVDMYPHVF RKKNRREVLI 
       430        440        450        460        470        480 
LGVSVVSFLV GLIMLTEGGM YVFQLFDYYA ASGMCLLFVA IFESLCVAWV YGAKRFYDNI 
       490        500        510        520        530        540 
EDMIGYRPWP LIKYCWLFLT PAVCTATFLF SLIKYTPLTY NKKYTYPWWG DALGWLLALS 
       550        560        570        580        590        600 
SMVCIPAWSL YRLGTLKGPF RERIRQLMCP AEDLPQRNPA GPSAPATPRT SLLRLTELES 
   
HC         10         20         30         40         50         60 
MDSRVSGTTS NGETKPVYPV MEKKEEDGTL ERGHWNNKME FVLSVAGEII GLGNVWRFPY 
        70         80         90        100        110        120 
LCYKNGGGAF FIPYLVFLFT CGIPVFLLET ALGQYTSQGG VTAWRKICPI FEGIGYASQM 
       130        140        150        160        170        180 
IVILLNVYYI IVLAWALFYL FSSFTIDLPW GGCYHEWNTE HCMEFQKTNG SLNGTSENAT 
       190        200        210        220        230        240 
SPVIEFWERR VLKISDGIQH LGALRWELAL CLLLAWVICY FCIWKGVKST GKVVYFTATF 
       250        260        270        280        290        300 
PYLMLVVLLI RGVTLPGAAQ GIQFYLYPNL TRLWDPQVWM DAGTQIFFSF AICLGCLTAL 
       310        320        330        340        350        360 
GSYNKYHNNC YRDCIALCFL NSGTSFVAGF AIFSILGFMS QEQGVPISEV AESGPGLAFI 
       370        380        390        400        410        420 
AYPRAVVMLP FSPLWACCFF FMVVLLGLDS QFVCVESLVT ALVDMYPHVF RKKNRREVLI 
       430        440        450        460        470        480 
LGVSVVSFLV GLIMLTEGGM YVFQLFDYYA ASGMCLLFVA IFESLCVAWV YGAKRFYDNI 
       490        500        510        520        530        540 
EDMIGYRPWP LIKYCWLFLT PAVCTATFLF SLIKYTPLTY NKKYTYPWWG DALGWLLALS 
       550        560        570        580        590        600 
SMVCIPAWSL YRLGTLKGPF RERIRQLMCP AEDLPQRNPA GPSAPATPRT SLLRLTELES 
   
HC



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Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9NSD5-1-unknown MDSRVS... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9NSD5-1-unknown MDSRVS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt88805
    Q9NSD5-1-unknown MDSRVS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt88806

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...LESHC 602 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...LESHC 602 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt84423

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)