TopFIND 4.0

Q9NY12: H/ACA ribonucleoprotein complex subunit 1

General Information

Protein names
- H/ACA ribonucleoprotein complex subunit 1
- Nucleolar protein family A member 1
- snoRNP protein GAR1
Gene names GAR1
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q9NY12

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSFRGGGRGG FNRGGGGGGF NRGGSSNHFR GGGGGGGGGN FRGGGRGGFG RGGGRGGFNK 
        70         80         90        100        110        120 
GQDQGPPERV VLLGEFLHPC EDDIVCKCTT DENKVPYFNA PVYLENKEQI GKVDEIFGQL 
       130        140        150        160        170        180 
RDFYFSVKLS ENMKASSFKK LQKFYIDPYK LLPLQRFLPR PPGEKGPPRG GGRGGRGGGR 
       190        200        210    
GGGGRGGGRG GGFRGGRGGG GGGFRGGRGG GFRGRGH

Isoforms

- Isoform 2 of H/ACA ribonucleoprotein complex subunit 1

Sequence View

        10         20         30         40         50         60 
MSFRGGGRGG FNRGGGGGGF NRGGSSNHFR GGGGGGGGGN FRGGGRGGFG RGGGRGGFNK 
        70         80         90        100        110        120 
GQDQGPPERV VLLGEFLHPC EDDIVCKCTT DENKVPYFNA PVYLENKEQI GKVDEIFGQL 
       130        140        150        160        170        180 
RDFYFSVKLS ENMKASSFKK LQKFYIDPYK LLPLQRFLPR PPGEKGPPRG GGRGGRGGGR 
       190        200        210    
GGGGRGGGRG GGFRGGRGGG GGGFRGGRGG GFRGRGH



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Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9NY12-1-unknown MSFRGG... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9NY12-1-unknown MSFRGG... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt75707

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RGRGH 217 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)