TopFIND 4.0

Q9S7R4: Pentatricopeptide repeat-containing protein At1g74900, mitochondrial

General Information

Protein names
- Pentatricopeptide repeat-containing protein At1g74900, mitochondrial
- Protein ORGANELLE TRANSCRIPT PROCESSING DEFECT 43
Gene names OTP43
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9S7R4

2

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MKRLFSKSLC TSAAGANLKP PPADSAAIAK LILSSPNTTH QDDQFLLSTK TTPWTPNLVN 
        70         80         90        100        110        120 
SVLKRLWNHG PKALQFFHFL DNHHREYVHD ASSFDLAIDI AARLHLHPTV WSLIHRMRSL 
       130        140        150        160        170        180 
RIGPSPKTFA IVAERYASAG KPDKAVKLFL NMHEHGCFQD LASFNTILDV LCKSKRVEKA 
       190        200        210        220        230        240 
YELFRALRGR FSVDTVTYNV ILNGWCLIKR TPKALEVLKE MVERGINPNL TTYNTMLKGF 
       250        260        270        280        290        300 
FRAGQIRHAW EFFLEMKKRD CEIDVVTYTT VVHGFGVAGE IKRARNVFDE MIREGVLPSV 
       310        320        330        340        350        360 
ATYNAMIQVL CKKDNVENAV VMFEEMVRRG YEPNVTTYNV LIRGLFHAGE FSRGEELMQR 
       370        380        390        400        410        420 
MENEGCEPNF QTYNMMIRYY SECSEVEKAL GLFEKMGSGD CLPNLDTYNI LISGMFVRKR 
       430        440        450        460        470        480 
SEDMVVAGKL LLEMVERGFI PRKFTFNRVL NGLLLTGNQA FAKEILRLQS KSGSRLLRKF 
   
RL

Isoforms

- Isoform 2 of Pentatricopeptide repeat-containing protein At1g74900, mitochondrial

Sequence View

        10         20         30         40         50         60 
MKRLFSKSLC TSAAGANLKP PPADSAAIAK LILSSPNTTH QDDQFLLSTK TTPWTPNLVN 
        70         80         90        100        110        120 
SVLKRLWNHG PKALQFFHFL DNHHREYVHD ASSFDLAIDI AARLHLHPTV WSLIHRMRSL 
       130        140        150        160        170        180 
RIGPSPKTFA IVAERYASAG KPDKAVKLFL NMHEHGCFQD LASFNTILDV LCKSKRVEKA 
       190        200        210        220        230        240 
YELFRALRGR FSVDTVTYNV ILNGWCLIKR TPKALEVLKE MVERGINPNL TTYNTMLKGF 
       250        260        270        280        290        300 
FRAGQIRHAW EFFLEMKKRD CEIDVVTYTT VVHGFGVAGE IKRARNVFDE MIREGVLPSV 
       310        320        330        340        350        360 
ATYNAMIQVL CKKDNVENAV VMFEEMVRRG YEPNVTTYNV LIRGLFHAGE FSRGEELMQR 
       370        380        390        400        410        420 
MENEGCEPNF QTYNMMIRYY SECSEVEKAL GLFEKMGSGD CLPNLDTYNI LISGMFVRKR 
       430        440        450        460        470        480 
SEDMVVAGKL LLEMVERGFI PRKFTFNRVL NGLLLTGNQA FAKEILRLQS KSGSRLLRKF 
   
RL



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Protein Neighborhood

Domains & Features

2 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9S7R4-0-unknown LMKRLF... 0 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9S7R4-1-unknown MKRLFS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt85825
    Q9S7R4-1-unknown MKRLFS... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...RKFRL 482 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...RKFRL 482 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt81443

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)