TopFIND 4.0

Q9SB00: Deoxyribodipyrimidine photo-lyase

General Information

Protein names
- Deoxyribodipyrimidine photo-lyase
- 4.1.99.3
- AtCPDII
- DNA photolyase
- Photoreactivating enzyme 1
- Protein UV RESISTANCE 2
Gene names PHR1
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9SB00

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MASTVSVQPG RIRILKKGSW QPLDQTVGPV VYWMFRDQRL KDNWALIHAV DLANRTNAPV 
        70         80         90        100        110        120 
AVVFNLFDQF LDAKARQLGF MLKGLRQLHH QIDSLQIPFF LLQGDAKETI PNFLTECGAS 
       130        140        150        160        170        180 
HLVTDFSPLR EIRRCKDEVV KRTSDSLAIH EVDAHNVVPM WAASSKLEYS ARTIRGKINK 
       190        200        210        220        230        240 
LLPDYLIEFP KLEPPKKKWT GMMDKKLVDW DSLIDKVVRE GAEVPEIEWC VPGEDAGIEV 
       250        260        270        280        290        300 
LMGNKDGFLT KRLKNYSTDR NNPIKPKALS GLSPYLHFGQ VSAQRCALEA RKVRSTSPQA 
       310        320        330        340        350        360 
VDTFLEELIV RRELSDNFCY YQPHYDSLKG AWEWARKSLM DHASDKREHI YSLEQLEKGL 
       370        380        390        400        410        420 
TADPLWNASQ LEMVYQGKMH GFMRMYWAKK ILEWTKGPEE ALSISIYLNN KYEIDGRDPS 
       430        440        450        460        470        480 
GYVGCMWSIC GVHDQGWKER PVFGKIRYMN YAGCKRKFNV DSYISYVKSL VSVTKKKRKA 
       490    
EEQLTRDSVD PKITIV

Isoforms

- Isoform 2 of Deoxyribodipyrimidine photo-lyase

Sequence View

        10         20         30         40         50         60 
MASTVSVQPG RIRILKKGSW QPLDQTVGPV VYWMFRDQRL KDNWALIHAV DLANRTNAPV 
        70         80         90        100        110        120 
AVVFNLFDQF LDAKARQLGF MLKGLRQLHH QIDSLQIPFF LLQGDAKETI PNFLTECGAS 
       130        140        150        160        170        180 
HLVTDFSPLR EIRRCKDEVV KRTSDSLAIH EVDAHNVVPM WAASSKLEYS ARTIRGKINK 
       190        200        210        220        230        240 
LLPDYLIEFP KLEPPKKKWT GMMDKKLVDW DSLIDKVVRE GAEVPEIEWC VPGEDAGIEV 
       250        260        270        280        290        300 
LMGNKDGFLT KRLKNYSTDR NNPIKPKALS GLSPYLHFGQ VSAQRCALEA RKVRSTSPQA 
       310        320        330        340        350        360 
VDTFLEELIV RRELSDNFCY YQPHYDSLKG AWEWARKSLM DHASDKREHI YSLEQLEKGL 
       370        380        390        400        410        420 
TADPLWNASQ LEMVYQGKMH GFMRMYWAKK ILEWTKGPEE ALSISIYLNN KYEIDGRDPS 
       430        440        450        460        470        480 
GYVGCMWSIC GVHDQGWKER PVFGKIRYMN YAGCKRKFNV DSYISYVKSL VSVTKKKRKA 
       490    
EEQLTRDSVD PKITIV



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9SB00-1-unknown MASTVS... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9SB00-1-unknown MASTVS... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt85105

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...KITIV 496 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...KITIV 496 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt80723

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)