TopFIND 4.0

Q9SZ20: Pentatricopeptide repeat-containing protein At4g26800

General Information

Protein names
- Pentatricopeptide repeat-containing protein At4g26800
Gene names
Organism Arabidopsis thaliana
Protease Family
Protease ID
Chromosome location
UniProt ID Q9SZ20

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MRWSIATAIA STAKGFLHLH HHFLKNSNPG IVLSPSLRFR FWVRAFSGTT IDYREVLRSG 
        70         80         90        100        110        120 
LHNIKFDDAF HLFVLMAYSY PLPSIVEFNK VLTAIAKMQM YDVVINLWKR IENAEGIEIS 
       130        140        150        160        170        180 
PDLYTCNILV NCFCRCFQPS SALSYLGKMM KLGIEPDIVT ASSLVNGFCL SNSIKDAVYV 
       190        200        210        220        230        240 
AGQMEKMGIK RDVVVDTILI DTLCKNRLVV PALEVLKRMK DRGISPNVVT YSSLITGLCK 
       250        260        270        280        290        300 
SGRLADAERR LHEMDSKKIN PNVITFSALI DAYAKRGKLS KVDSVYKMMI QMSIDPNVFT 
       310        320        330        340        350        360 
YSSLIYGLCM HNRVDEAIKM LDLMISKGCT PNVVTYSTLA NGFFKSSRVD DGIKLLDDMP 
       370        380        390        400        410        420 
QRGVAANTVS CNTLIKGYFQ AGKIDLALGV FGYMTSNGLI PNIRSYNIVL AGLFANGEVE 
       430        440        450        460        470        480 
KALSRFEHMQ KTRNDLDIIT YTIMIHGMCK ACMVKEAYDL FYKLKFKRVE PDFKAYTIMI 
       490        500        510    
AELNRAGMRT EADALNRFYQ KHVRQNESAP AEVS

Isoforms

- Isoform 2 of Pentatricopeptide repeat-containing protein At4g26800

Sequence View

        10         20         30         40         50         60 
MRWSIATAIA STAKGFLHLH HHFLKNSNPG IVLSPSLRFR FWVRAFSGTT IDYREVLRSG 
        70         80         90        100        110        120 
LHNIKFDDAF HLFVLMAYSY PLPSIVEFNK VLTAIAKMQM YDVVINLWKR IENAEGIEIS 
       130        140        150        160        170        180 
PDLYTCNILV NCFCRCFQPS SALSYLGKMM KLGIEPDIVT ASSLVNGFCL SNSIKDAVYV 
       190        200        210        220        230        240 
AGQMEKMGIK RDVVVDTILI DTLCKNRLVV PALEVLKRMK DRGISPNVVT YSSLITGLCK 
       250        260        270        280        290        300 
SGRLADAERR LHEMDSKKIN PNVITFSALI DAYAKRGKLS KVDSVYKMMI QMSIDPNVFT 
       310        320        330        340        350        360 
YSSLIYGLCM HNRVDEAIKM LDLMISKGCT PNVVTYSTLA NGFFKSSRVD DGIKLLDDMP 
       370        380        390        400        410        420 
QRGVAANTVS CNTLIKGYFQ AGKIDLALGV FGYMTSNGLI PNIRSYNIVL AGLFANGEVE 
       430        440        450        460        470        480 
KALSRFEHMQ KTRNDLDIIT YTIMIHGMCK ACMVKEAYDL FYKLKFKRVE PDFKAYTIMI 
       490        500        510    
AELNRAGMRT EADALNRFYQ KHVRQNESAP AEVS



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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9SZ20-1-unknown MRWSIA... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...PAEVS 514 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...PAEVS 514 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt81484

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)