TopFIND 4.0

Q9WV25: Poly(U)-binding-splicing factor PUF60

General Information

Protein names
- Poly(U)-binding-splicing factor PUF60
- 60 kDa poly(U)-binding-splicing factor
- RNA-binding protein Siah-BP
- Siah-binding protein 1
Gene names Puf60
Organism Rattus norvegicus
Protease Family
Protease ID
Chromosome location
UniProt ID Q9WV25

1

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MATATIALQV NGQQGGGSEP AAAAAAAAAA VVAAGDKWKP PQGTESIKME NGQSTGTKLG 
        70         80         90        100        110        120 
LPPLTPEQQE ALQKAKKYAM EQSIKSVLVK QTIAHQQQQL TNLQMAAVTM GFGDPLSPLQ 
       130        140        150        160        170        180 
SMAAQRQRAL AIMCRVYVGS IYYELGEDTI RQAFAPFGPI KSIDMSWDSV TMKHKGFAFV 
       190        200        210        220        230        240 
EYEVPEAAQL ALEQMNSVML GGRNIKVGRP SNIGQAQPII DQLAEEARAF NRIYVASVHQ 
       250        260        270        280        290        300 
DLSDDDIKSV FEAFGKIKSC TLARDPTTGK HKGYGFIEYE KAQSSQDAVS SMNLFDLGGQ 
       310        320        330        340        350        360 
YLRVGKAVTP PMPLLTPATP GGLPPAAAVA AAAATAKITA QEAVAGAAVL GTLATPGLVS 
       370        380        390        400        410        420 
PALTLAQPLG ALPQAVMAAQ APGVITGVTP ARPPIPVTIP SVGVVNPILA SPPTLGLLEP 
       430        440        450        460        470        480 
KKEKEEEELF PESERPEMLS EQEHMSISGS SARHMVMQKL LRKQESTVMV LRNMVDPKDI 
       490        500        510        520        530        540 
DDDLEGEVTE ECGKFGAVNR VIIYQEKQGE EEDAEIIVKI FVEFSMASET HKAIQALNGR 
       550        560    
WFGGRKVVAE VYDQERFDNS DLSA

Isoforms

- Isoform 2 of Poly(U)-binding-splicing factor PUF60

Sequence View

        10         20         30         40         50         60 
MATATIALQV NGQQGGGSEP AAAAAAAAAA VVAAGDKWKP PQGTESIKME NGQSTGTKLG 
        70         80         90        100        110        120 
LPPLTPEQQE ALQKAKKYAM EQSIKSVLVK QTIAHQQQQL TNLQMAAVTM GFGDPLSPLQ 
       130        140        150        160        170        180 
SMAAQRQRAL AIMCRVYVGS IYYELGEDTI RQAFAPFGPI KSIDMSWDSV TMKHKGFAFV 
       190        200        210        220        230        240 
EYEVPEAAQL ALEQMNSVML GGRNIKVGRP SNIGQAQPII DQLAEEARAF NRIYVASVHQ 
       250        260        270        280        290        300 
DLSDDDIKSV FEAFGKIKSC TLARDPTTGK HKGYGFIEYE KAQSSQDAVS SMNLFDLGGQ 
       310        320        330        340        350        360 
YLRVGKAVTP PMPLLTPATP GGLPPAAAVA AAAATAKITA QEAVAGAAVL GTLATPGLVS 
       370        380        390        400        410        420 
PALTLAQPLG ALPQAVMAAQ APGVITGVTP ARPPIPVTIP SVGVVNPILA SPPTLGLLEP 
       430        440        450        460        470        480 
KKEKEEEELF PESERPEMLS EQEHMSISGS SARHMVMQKL LRKQESTVMV LRNMVDPKDI 
       490        500        510        520        530        540 
DDDLEGEVTE ECGKFGAVNR VIIYQEKQGE EEDAEIIVKI FVEFSMASET HKAIQALNGR 
       550        560    
WFGGRKVVAE VYDQERFDNS DLSA



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Protein Neighborhood

Domains & Features

1 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini
    Name Sequence Position Modification Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMID)
    Q9WV25-1-unknown MATATI... 1 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    Q9WV25-1-unknown MATATI... 1 inferred from isoform by sequence similarity unknown TopFIND inferred from TNt193360

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...SDLSA 564 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...SDLSA 564 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt153306

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)