P42285: Exosome RNA helicase MTR4 {ECO:0000305}
Protein names | - Exosome RNA helicase MTR4 {ECO:0000305} - 3.6.4.13 - ATP-dependent RNA helicase DOB1 {ECO:0000303|PubMed:16782053} - ATP-dependent RNA helicase SKIV2L2 - Superkiller viralicidic activity 2-like 2 - TRAMP-like complex helicase |
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Gene names | SKIV2L2 |
Organism | Homo sapiens |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | P42285 |
6
N-termini
3
C-termini
2
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MADAFGDELF SVFEGDSTTA AGTKKDKEKD KGKWKGPPGS ADKAGKRFDG KLQSESTNNG
70 80 90 100 110 120
KNKRDVDFEG TDEPIFGKKP RIEESITEDL SLADLMPRVK VQSVETVEGC THEVALPAEE
130 140 150 160 170 180
DYLPLKPRVG KAAKEYPFIL DAFQREAIQC VDNNQSVLVS AHTSAGKTVC AEYAIALALR
190 200 210 220 230 240
EKQRVIFTSP IKALSNQKYR EMYEEFQDVG LMTGDVTINP TASCLVMTTE ILRSMLYRGS
250 260 270 280 290 300
EVMREVAWVI FDEIHYMRDS ERGVVWEETI ILLPDNVHYV FLSATIPNAR QFAEWICHLH
310 320 330 340 350 360
KQPCHVIYTD YRPTPLQHYI FPAGGDGLHL VVDENGDFRE DNFNTAMQVL RDAGDLAKGD
370 380 390 400 410 420
QKGRKGGTKG PSNVFKIVKM IMERNFQPVI IFSFSKKDCE AYALQMTKLD FNTDEEKKMV
430 440 450 460 470 480
EEVFSNAIDC LSDEDKKLPQ VEHVLPLLKR GIGIHHGGLL PILKETIEIL FSEGLIKALF
490 500 510 520 530 540
ATETFAMGIN MPARTVLFTN ARKFDGKDFR WISSGEYIQM SGRAGRRGMD DRGIVILMVD
550 560 570 580 590 600
EKMSPTIGKQ LLKGSADPLN SAFHLTYNMV LNLLRVEEIN PEYMLEKSFY QFQHYRAIPG
610 620 630 640 650 660
VVEKVKNSEE QYNKIVIPNE ESVVIYYKIR QQLAKLGKEI EEYIHKPKYC LPFLQPGRLV
670 680 690 700 710 720
KVKNEGDDFG WGVVVNFSKK SNVKPNSGEL DPLYVVEVLL RCSKESLKNS ATEAAKPAKP
730 740 750 760 770 780
DEKGEMQVVP VLVHLLSAIS SVRLYIPKDL RPVDNRQSVL KSIQEVQKRF PDGIPLLDPI
790 800 810 820 830 840
DDMGIQDQGL KKVIQKVEAF EHRMYSHPLH NDPNLETVYT LCEKKAQIAI DIKSAKRELK
850 860 870 880 890 900
KARTVLQMDE LKCRKRVLRR LGFATSSDVI EMKGRVACEI SSADELLLTE MMFNGLFNDL
910 920 930 940 950 960
SAEQATALLS CFVFQENSSE MPKLTEQLAG PLRQMQECAK RIAKVSAEAK LEIDEETYLS
970 980 990 1000 1010 1020
SFKPHLMDVV YTWATGATFA HICKMTDVFE GSIIRCMRRL EELLRQMCQA AKAIGNTELE
1030 1040
NKFAEGITKI KRDIVFAASL YL
Isoforms
Sequence View
Protein Neighborhood
Domains & Features
6 N-termini - 3 C-termini - 2 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
P42285-2-unknown | MADAFG... | 1 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
P42285-2-unknown | MADAFG... | 1 | COFRADIC | Gevaert K. | Van Damme P et al.: PC3-cells, Complementary positional proteomics for screening substrates... | 20526345 | |||
P42285-2-Acetylation | ADAFGD... | 2 | acetylation- | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | ||
P42285-2-Acetylation | ADAFGD... | 2 | acetylation- | other | CNRS/ISV | Large_scale_NTA_Human | |||
P42285-11- | SVFEGD... | 11 | Subtiligase Based Positive Selection | Wells | Jurkat_untreated | 23264352 | |||
P42285-11- | SVFEGD... | 11 | Subtiligase Based Positive Selection | Wells | THP_untreated | 23264352 | |||
P42285-11-unknown | SVFEGD... | 11 | unknown | Mahrus S. et al.: nonapototic Jurkat cells, Global Sequencing of Proteolytic Cleavage... | 18722006 | ||||
P42285-90-unknown | LSLADL... | 90 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC11515 | |||
P42285-988-unknown | VFEGSI... | 988 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC1224 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...SITEDL | 89 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC11515 | |||
...CKMTDV | 987 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC1224 | |||
...ASLYL | 1042 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
GRAB_HUMAN | 89 | TEDL.|.LSLA | inferred from experiment | unknown | MEROPS | Gevaert K | Van Damme P et al.:Complementary positional proteo... (M14.017) | 20526345, |
CASP1_HUMAN | 987 | MTDV.|.VFEG | inferred from experiment | unknown | MEROPS | Wells JA | Agard NJ et al.:Inflammatory stimuli regulate c... (C14.001) | 20173201, |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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