P49312: Heterogeneous nuclear ribonucleoprotein A1
Protein names | - Heterogeneous nuclear ribonucleoprotein A1 - hnRNP A1 - HDP-1 - Helix-destabilizing protein - Single-strand-binding protein - Topoisomerase-inhibitor suppressed - hnRNP core protein A1 - Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed |
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Gene names | Hnrnpa1 |
Organism | Mus musculus |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | P49312 |
7
N-termini
5
C-termini
4
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MSKSESPKEP EQLRKLFIGG LSFETTDESL RSHFEQWGTL TDCVVMRDPN TKRSRGFGFV
70 80 90 100 110 120
TYATVEEVDA AMNARPHKVD GRVVEPKRAV SREDSQRPGA HLTVKKIFVG GIKEDTEEHH
130 140 150 160 170 180
LRDYFEQYGK IEVIEIMTDR GSGKKRGFAF VTFDDHDSVD KIVIQKYHTV NGHNCEVRKA
190 200 210 220 230 240
LSKQEMASAS SSQRGRSGSG NFGGGRGGGF GGNDNFGRGG NFSGRGGFGG SRGGGGYGGS
250 260 270 280 290 300
GDGYNGFGND GSNFGGGGSY NDFGNYNNQS SNFGPMKGGN FGGRSSGPYG GGGQYFAKPR
310 320
NQGGYGGSSS SSSYGSGRRF
Isoforms
- Isoform Short of Heterogeneous nuclear ribonucleoprotein A1Sequence View
10 20 30 40 50 60
MSKSESPKEP EQLRKLFIGG LSFETTDESL RSHFEQWGTL TDCVVMRDPN TKRSRGFGFV
70 80 90 100 110 120
TYATVEEVDA AMNARPHKVD GRVVEPKRAV SREDSQRPGA HLTVKKIFVG GIKEDTEEHH
130 140 150 160 170 180
LRDYFEQYGK IEVIEIMTDR GSGKKRGFAF VTFDDHDSVD KIVIQKYHTV NGHNCEVRKA
190 200 210 220 230 240
LSKQEMASAS SSQRGRSGSG NFGGGRGGGF GGNDNFGRGG NFSGRGGFGG SRGGGGYGGS
250 260 270 280 290 300
GDGYNGFGND GSNFGGGGSY NDFGNYNNQS SNFGPMKGGN FGGRSSGPYG GGGQYFAKPR
310 320
NQGGYGGSSS SSSYGSGRRF
Protein Neighborhood
Domains & Features
7 N-termini - 5 C-termini - 4 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
P49312-1-Acetylation | MSKSES... | 1 | acetylation- | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | ||
P49312-1-Acetylation | MSKSES... | 1 | acetylation- | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt96349 | ||
P49312-1-unknown | MSKSES... | 1 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt88050 | |||
P49312-2-Acetylation | SKSESP... | 2 | acetylation- | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | ||
P49312-2-Acetylation | SKSESP... | 2 | acetylation- | inferred from similarity | unknown | UniProtKB | inferred from uniprot (by similarity) | ||
P49312-2-Acetylation | SKSESP... | 2 | acetylation- | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt110097 | ||
P49312-21-unknown | LSFETT... | 21 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC33588 | |||
P49312-21-unknown | LSFETT... | 21 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt136907 | |||
P49312-60-unknown | VTYATV... | 60 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30009 | |||
P49312-60-unknown | VTYATV... | 60 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt139894 | |||
P49312-63-unknown | ATVEEV... | 63 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30011 | |||
P49312-63-unknown | ATVEEV... | 63 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt140166 | |||
P49312-65-unknown | VEEVDA... | 65 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30013 | |||
P49312-65-unknown | VEEVDA... | 65 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt140280 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...LFIGGL | 20 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC33588 | |||
...RGFGFV | 59 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30009 | |||
...RGFGFV | 59 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt122999 | |||
...GFVTYA | 62 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30011 | |||
...GFVTYA | 62 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt123276 | |||
...VTYATV | 64 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC30013 | |||
...VTYATV | 64 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt123402 | |||
...SGRRF | 320 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
MMP2_MOUSE | 20 | IGGL.|.LSFE | inferred from experiment | unknown | MEROPS | Merops MMP2_MOUSE -> ROA1_MOUSE @20 | ||
CATE_MOUSE | 59 | FGFV.|.VTYA | inferred from experiment | unknown | MEROPS | Merops CATE_MOUSE -> ROA1_MOUSE @59 | ||
CATE_MOUSE | 62 | VTYA.|.ATVE | inferred from experiment | unknown | MEROPS | Merops CATE_MOUSE -> ROA1_MOUSE @62 | ||
CATE_MOUSE | 64 | YATV.|.VEEV | inferred from experiment | unknown | MEROPS | Merops CATE_MOUSE -> ROA1_MOUSE @64 |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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