TopFIND 4.0

P62315: Small nuclear ribonucleoprotein Sm D1

General Information

Protein names	- Small nuclear ribonucleoprotein Sm D1 - Sm-D1 - Sm-D autoantigen - snRNP core protein D1
Gene names	Snrpd1
Organism	Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID	P62315

3

N-termini

3

C-termini

3

Cleavages

0

Substrates

Sequence

10 20 30 40 50 60
MKLVRFLMKL SHETVTIELK NGTQVHGTIT GVDVSMNTHL KAVKMTLKNR EPVQLETLSI
70 80 90 100 110
RGNNIRYFIL PDSLPLDTLL VDVEPKVKSK KREAVAGRGR GRGRGRGRGR GRGRGGPRR

Isoforms

Sequence View

Protein Neighborhood

Domains & Features

3 N-termini - 3 C-termini - 3 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
P62315-1-unknown	MKLVRF...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P62315-80-unknown	LVDVEP...	80		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28982
P62315-81-unknown	VDVEPK...	81		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28983
P62315-81-unknown	VDVEPK...	81		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC30178
P62315-81-unknown	VDVEPK...	81		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P62315-81-unknown	VDVEPK...	81		inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)

C-termini

Name	Sequence	Position	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
	...PLDTLL	79	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28982
	...LDTLLV	80	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28983
	...LDTLLV	80	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC30178
	...GGPRR	119	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
CATD_MOUSE	79	DTLL.\|.LVDV	inferred from experiment	unknown	MEROPS		Merops CATD_MOUSE -> SMD1_MOUSE @79
CATD_MOUSE	80	TLLV.\|.VDVE	inferred from experiment	unknown	MEROPS		Merops CATD_MOUSE -> SMD1_MOUSE @80
CATE_MOUSE	80	TLLV.\|.VDVE	inferred from experiment	unknown	MEROPS		Merops CATE_MOUSE -> SMD1_MOUSE @80

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)