P97298: Pigment epithelium-derived factor

General Information

Protein names	- Pigment epithelium-derived factor - PEDF - Caspin - Serpin F1 - Stromal cell-derived factor 3 - SDF-3
Gene names	Serpinf1
Organism	Mus musculus
Protease Family
Protease ID	I04.979
Chromosome location
UniProt ID	P97298

3 N-termini

5 C-termini

1 Cleavages

0 Substrates

Sequence

        10         20         30         40         50         60
MQALVLLLWT GALLGHGSSQ NVPSSSEGSP VPDSTGEPVE EEDPFFKVPV NKLAAAVSNF
        70         80         90        100        110        120
GYDLYRLRSS ASPTGNVLLS PLSVATALSA LSLGAEHRTE SVIHRALYYD LITNPDIHST
       130        140        150        160        170        180
YKELLASVTA PEKNLKSASR IVFERKLRVK SSFVAPLEKS YGTRPRILTG NPRVDLQEIN
       190        200        210        220        230        240
NWVQAQMKGK IARSTREMPS ALSILLLGVA YFKGQWVTKF DSRKTTLQDF HLDEDRTVRV
       250        260        270        280        290        300
PMMSDPKAIL RYGLDSDLNC KIAQLPLTGS MSIIFFLPLT VTQNLTMIEE SLTSEFIHDI
       310        320        330        340        350        360
DRELKTIQAV LTVPKLKLSF EGELTKSLQD MKLQSLFESP DFSKITGKPV KLTQVEHRAA
       370        380        390        400        410
FEWNEEGAGS SPSPGLQPVR LTFPLDYHLN QPFLFVLRDT DTGALLFIGR ILDPSST

Isoforms

Sequence View

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Directness:

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Evidence Codes:

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Protease Assignment Confidence:

Evidence Names:

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Protein Neighborhood

Domains & Features

3 N-termini - 5 C-termini - 1 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Evidence type	Method	Source (database)	Evidence name
P97298-20-unknown	QNVPSS...	20	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot
P97298-20-unknown	QNVPSS...	20	inferred from similarity	unknown	UniProtKB	inferred from uniprot (by similarity)
P97298-56-unknown	AVSNFG...	56	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33826
P97298-113-unknown	TNPDIH...	113	inferred from electronic annotation	unknown	TISdb	inferred from TISdb

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...NKLAAA	55	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33826
...FGYDLY	64	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSMUSP00000131531
...VAYFKG	213	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSMUSP00000114761
...LDSDLN	258	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSMUSP00000121180
...DPSST	417	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
MMP2_MOUSE	55	LAAA.\|.AVSN	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)