Q04857: Collagen alpha-1(VI) chain
| Protein names | - Collagen alpha-1(VI) chain |
|---|---|
| Gene names | Col6a1 |
| Organism | Mus musculus |
| Protease Family | |
| Protease ID | |
| Chromosome location | |
| UniProt ID | Q04857 |
5
N-termini
2
C-termini
1
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MRLAHALLPL LLQACWVATQ DIQGSKAIAF QDCPVDLFFV LDTSESVALR LKPYGALVDK
70 80 90 100 110 120
VKSFTKRFID NLRDRYYRCD RNLVWNAGAL HYSDEVEIIR GLTRMPSGRD ELKASVDAVK
130 140 150 160 170 180
YFGKGTYTDC AIKKGLEELL IGGSHLKENK YLIVVTDGHP LEGYKEPCGG LEDAVNEAKH
190 200 210 220 230 240
LGIKVFSVAI TPDHLEPRLS IIATDHTYRR NFTAADWGHS RDAEEVISQT IDTIVDMIKN
250 260 270 280 290 300
NVEQVCCSFE CQAARGPPGP RGDPGYEGER GKPGLPGEKG EAGDPGRPGD LGPVGYQGMK
310 320 330 340 350 360
GEKGSRGEKG SRGPKGYKGE KGKRGIDGVD GMKGETGYPG LPGCKGSPGF DGIQGPPGPK
370 380 390 400 410 420
GDAGAFGMKG EKGEAGADGE AGRPGNSGSP GDEGDPGEPG PPGEKGEAGD EGNAGPDGAP
430 440 450 460 470 480
GERGGPGERG PRGTPGVRGP RGDPGEAGPQ GDQGREGPVG IPGDSGEAGP IGPKGYRGDE
490 500 510 520 530 540
GPPGPEGLRG APGPVGPPGD PGLMGERGED GPPGNGTEGF PGFPGYPGNR GPPGLNGTKG
550 560 570 580 590 600
YPGLKGDEGE VGDPGEDNND ISPRGVKGAK GYRGPEGPQG PPGHVGPPGP DECEILDIIM
610 620 630 640 650 660
KMCSCCECTC GPIDILFVLD SSESIGLQNF EIAKDFIIKV IDRLSKDELV KFEPGQSHAG
670 680 690 700 710 720
VVQYSHNQMQ EHVDMRSPNV RNAQDFKEAV KKLQWMAGGT FTGEALQYTR DRLLPPTQNN
730 740 750 760 770 780
RIALVITDGR SDTQRDTTPL SVLCGADIQV VSVGIKDVFG FVAGSDQLNV ISCQGLSQGR
790 800 810 820 830 840
PGISLVKENY AELLDDGFLK NITAQICIDK KCPDYTCPIT FSSPADITIL LDSSASVGSH
850 860 870 880 890 900
NFETTKVFAK RLAERFLSAG RADPSQDVRV AVVQYSGQGQ QQPGRAALQF LQNYTVLASS
910 920 930 940 950 960
VDSMDFINDA TDVNDALSYV TRFYREASSG ATKKRVLLFS DGNSQGATAE AIEKAVQEAQ
970 980 990 1000 1010 1020
RAGIEIFVVV VGPQVNEPHI RVLVTGKTAE YDVAFGERHL FRVPNYQALL RGVLYQTVSR
KVALG
Isoforms
Sequence View
Protein Neighborhood
Domains & Features
5 N-termini - 2 C-termini - 1 Cleavages - 0 Substrates
N-termini
| Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
|---|---|---|---|---|---|---|---|---|---|
| Q04857-20-unknown | QDIQGS... | 20 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
| Q04857-32-unknown | DCPVDL... | 32 | inferred from electronic annotation | unknown | TISdb | inferred from TISdb | |||
| Q04857-70-unknown | DNLRDR... | 70 | inferred from electronic annotation | unknown | TISdb | inferred from TISdb | |||
| Q04857-125-unknown | GTYTDC... | 125 | inferred from electronic annotation | unknown | TISdb | inferred from TISdb | |||
| Q04857-488-unknown | LRGAPG... | 488 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC33893 |
C-termini
| Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
|---|---|---|---|---|---|---|---|---|
| ...PGPEGL | 487 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC33893 | |||
| ...KVALG | 1025 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot |
Cleavages
| Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
|---|---|---|---|---|---|---|---|---|
| MMP2_MOUSE | 487 | PEGL.|.LRGA | inferred from experiment | unknown | MEROPS | Merops MMP2_MOUSE -> CO6A1_MOUSE @487 |
Substrates
| Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
|---|