TopFIND 4.0

Q96GM5: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

General Information

Protein names
- SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
- 60 kDa BRG-1/Brm-associated factor subunit A
- BRG1-associated factor 60A
- BAF60A
- SWI/SNF complex 60 kDa subunit
Gene names SMARCD1
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q96GM5

3

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MAARAGFQSV APSGGAGASG GAGAAAALGP GGTPGPPVRM GPAPGQGLYR SPMPGAAYPR 
        70         80         90        100        110        120 
PGMLPGSRMT PQGPSMGPPG YGGNPSVRPG LAQSGMDQSR KRPAPQQIQQ VQQQAVQNRN 
       130        140        150        160        170        180 
HNAKKKKMAD KILPQRIREL VPESQAYMDL LAFERKLDQT IMRKRLDIQE ALKRPIKQKR 
       190        200        210        220        230        240 
KLRIFISNTF NPAKSDAEDG EGTVASWELR VEGRLLEDSA LSKYDATKQK RKFSSFFKSL 
       250        260        270        280        290        300 
VIELDKDLYG PDNHLVEWHR TATTQETDGF QVKRPGDVNV RCTVLLMLDY QPPQFKLDPR 
       310        320        330        340        350        360 
LARLLGIHTQ TRPVIIQALW QYIKTHKLQD PHEREFVICD KYLQQIFESQ RMKFSEIPQR 
       370        380        390        400        410        420 
LHALLMPPEP IIINHVISVD PNDQKKTACY DIDVEVDDTL KTQMNSFLLS TASQQEIATL 
       430        440        450        460        470        480 
DNKIHETIET INQLKTQREF MLSFARDPQG FINDWLQSQC RDLKTMTDVV GNPEEERRAE 
       490        500        510    
FYFQPWAQEA VCRYFYSKVQ QRRQELEQAL GIRNT

Isoforms

- Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

Sequence View

        10         20         30         40         50         60 
MAARAGFQSV APSGGAGASG GAGAAAALGP GGTPGPPVRM GPAPGQGLYR SPMPGAAYPR 
        70         80         90        100        110        120 
PGMLPGSRMT PQGPSMGPPG YGGNPSVRPG LAQSGMDQSR KRPAPQQIQQ VQQQAVQNRN 
       130        140        150        160        170        180 
HNAKKKKMAD KILPQRIREL VPESQAYMDL LAFERKLDQT IMRKRLDIQE ALKRPIKQKR 
       190        200        210        220        230        240 
KLRIFISNTF NPAKSDAEDG EGTVASWELR VEGRLLEDSA LSKYDATKQK RKFSSFFKSL 
       250        260        270        280        290        300 
VIELDKDLYG PDNHLVEWHR TATTQETDGF QVKRPGDVNV RCTVLLMLDY QPPQFKLDPR 
       310        320        330        340        350        360 
LARLLGIHTQ TRPVIIQALW QYIKTHKLQD PHEREFVICD KYLQQIFESQ RMKFSEIPQR 
       370        380        390        400        410        420 
LHALLMPPEP IIINHVISVD PNDQKKTACY DIDVEVDDTL KTQMNSFLLS TASQQEIATL 
       430        440        450        460        470        480 
DNKIHETIET INQLKTQREF MLSFARDPQG FINDWLQSQC RDLKTMTDVV GNPEEERRAE 
       490        500        510    
FYFQPWAQEA VCRYFYSKVQ QRRQELEQAL GIRNT



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Protease Assignment Confidence:


Evidence Names:


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Protein Neighborhood

Domains & Features

3 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...GIRNT 515 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...GIRNT 515 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt85703

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)