Q96LT9: RNA-binding region-containing protein 3

General Information

Protein names	- RNA-binding region-containing protein 3 - RNA-binding motif protein 40 - RNA-binding protein 40 - U11/U12 small nuclear ribonucleoprotein 65 kDa protein - U11/U12 snRNP 65 kDa protein - U11/U12-65K
Gene names	RNPC3
Organism	Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID	Q96LT9

3 N-termini

2 C-termini

1 Cleavages

0 Substrates

Sequence

Isoforms

- Isoform 2 of RNA-binding protein 40 - Isoform 2 of RNA-binding region-containing protein 3

Sequence View

        10         20         30         40         50         60
MAAPEQPLAI SRGCTSSSSL SPPRGDRTLL VRHLPAELTA EEKEDLLKYF GAQSVRVLSD
        70         80         90        100        110        120
KGRLKHTAFA TFPNEKAAIK ALTRLHQLKL LGHTLVVEFA KEQDRVHSPC PTSGSEKKKR
       130        140        150        160        170        180
SDDPVEDDKE KKELGYLTVE NGIAPNHGLT FPLNSCLKYM YPPPSSTILA NIVNALASVP
       190        200        210        220        230        240
KFYVQVLHLM NKMNLPTPFG PITARPPMYE DYMPLHAPLP PTSPQPPEEP PLPDEDEELS
       250        260        270        280        290        300
SEESEYESTD DEDRQRMNKL MELANLQPKR PKTIKQRHVR KKRKIKDMLN TPLCPSHSSL
       310        320        330        340        350        360
HPVLLPSDVF DQPQPVGNKR IEFHISTDMP AAFKKDLEKE QNCEEKNHDL PATEVDASNI
       370        380        390        400        410        420
GFGKIFPKPN LDITEEIKED SDEMPSECIS RRELEKGRIS REEMETLSVF RSYEPGEPNC
       430        440        450        460        470        480
RIYVKNLAKH VQEKDLKYIF GRYVDFSSET QRIMFDIRLM KEGRMKGQAF IGLPNEKAAA
       490        500        510
KALKEANGYV LFGKPMVVQF ARSARPKQDP KEGKRKC         10         20         30         40         50         60
MAAPEQPLAI SRGCTSSSSL SPPRGDRTLL VRHLPAELTA EEKEDLLKYF GAQSVRVLSD
        70         80         90        100        110        120
KGRLKHTAFA TFPNEKAAIK ALTRLHQLKL LGHTLVVEFA KEQDRVHSPC PTSGSEKKKR
       130        140        150        160        170        180
SDDPVEDDKE KKELGYLTVE NGIAPNHGLT FPLNSCLKYM YPPPSSTILA NIVNALASVP
       190        200        210        220        230        240
KFYVQVLHLM NKMNLPTPFG PITARPPMYE DYMPLHAPLP PTSPQPPEEP PLPDEDEELS
       250        260        270        280        290        300
SEESEYESTD DEDRQRMNKL MELANLQPKR PKTIKQRHVR KKRKIKDMLN TPLCPSHSSL
       310        320        330        340        350        360
HPVLLPSDVF DQPQPVGNKR IEFHISTDMP AAFKKDLEKE QNCEEKNHDL PATEVDASNI
       370        380        390        400        410        420
GFGKIFPKPN LDITEEIKED SDEMPSECIS RRELEKGRIS REEMETLSVF RSYEPGEPNC
       430        440        450        460        470        480
RIYVKNLAKH VQEKDLKYIF GRYVDFSSET QRIMFDIRLM KEGRMKGQAF IGLPNEKAAA
       490        500        510
KALKEANGYV LFGKPMVVQF ARSARPKQDP KEGKRKC

Filter Information:

(REFRESH)

Directness:

Physiological Relevance:

Evidence Codes:

Methodology:

Perturbation of System:

Biological System:

Protease Assignment Confidence:

Evidence Names:

Database:

Lab:

Protein Neighborhood

Domains & Features

3 N-termini - 2 C-termini - 1 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
Q96LT9-1-unknown	MAAPEQ...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q96LT9-1-unknown	MAAPEQ...	1		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt87126
Q96LT9-2-acetylation	AAPEQP...	2	acetylation-		COFRADIC		Gevaert K.	Van Damme P et al.: Complementary positional proteomics for screening substrates...	20526345
Q96LT9-2-acetylation	AAPEQP...	2	acetylation-		COFRADIC		Gevaert K.	Van Damme P et al.: PC3-cells, Complementary positional proteomics for screening substrates...	20526345
Q96LT9-2-acetylation	AAPEQP...	2	acetylation-	inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt162944
Q96LT9-381-unknown	SDEMPS...	381		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC13087
Q96LT9-381-unknown	SDEMPS...	381		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt151603

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...EIKEDS	380	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC13087
...EIKEDS	380	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt135010
...GKRKC	517	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot
...GKRKC	517	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt82744

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
GRAB_HUMAN	380	KEDS.\|.SDEM	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Complementary positional proteo... (M14.017)	20526345,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)