TopFIND 4.0

Q9BQ65: U6 snRNA phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_03040}

General Information

Protein names
- U6 snRNA phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_03040}
- hUsb1
- 3.1.4.- {ECO:0000255|HAMAP-Rule:MF_03040}
Gene names USB1
Organism Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID Q9BQ65

3

N-termini

1

C-termini

0

Cleavages

0

Substrates

Sequence

        10         20         30         40         50         60 
MSAAPLVGYS SSGSEDESED GMRTRPGDGS HRRGQSPLPR QRFPVPDSVL NMFPGTEEGP 
        70         80         90        100        110        120 
EDDSTKHGGR VRTFPHERGN WATHVYVPYE AKEEFLDLLD VLLPHAQTYV PRLVRMKVFH 
       130        140        150        160        170        180 
LSLSQSVVLR HHWILPFVQA LKARMTSFHR FFFTANQVKI YTNQEKTRTF IGLEVTSGHA 
       190        200        210        220        230        240 
QFLDLVSEVD RVMEEFNLTT FYQDPSFHLS LAWCVGDARL QLEGQCLQEL QAIVDGFEDA 
       250        260    
EVLLRVHTEQ VRCKSGNKFF SMPLK

Isoforms

- Isoform 2 of U6 snRNA phosphodiesterase - Isoform 3 of U6 snRNA phosphodiesterase

Sequence View

        10         20         30         40         50         60 
MSAAPLVGYS SSGSEDESED GMRTRPGDGS HRRGQSPLPR QRFPVPDSVL NMFPGTEEGP 
        70         80         90        100        110        120 
EDDSTKHGGR VRTFPHERGN WATHVYVPYE AKEEFLDLLD VLLPHAQTYV PRLVRMKVFH 
       130        140        150        160        170        180 
LSLSQSVVLR HHWILPFVQA LKARMTSFHR FFFTANQVKI YTNQEKTRTF IGLEVTSGHA 
       190        200        210        220        230        240 
QFLDLVSEVD RVMEEFNLTT FYQDPSFHLS LAWCVGDARL QLEGQCLQEL QAIVDGFEDA 
       250        260    
EVLLRVHTEQ VRCKSGNKFF SMPLK         10         20         30         40         50         60 
MSAAPLVGYS SSGSEDESED GMRTRPGDGS HRRGQSPLPR QRFPVPDSVL NMFPGTEEGP 
        70         80         90        100        110        120 
EDDSTKHGGR VRTFPHERGN WATHVYVPYE AKEEFLDLLD VLLPHAQTYV PRLVRMKVFH 
       130        140        150        160        170        180 
LSLSQSVVLR HHWILPFVQA LKARMTSFHR FFFTANQVKI YTNQEKTRTF IGLEVTSGHA 
       190        200        210        220        230        240 
QFLDLVSEVD RVMEEFNLTT FYQDPSFHLS LAWCVGDARL QLEGQCLQEL QAIVDGFEDA 
       250        260    
EVLLRVHTEQ VRCKSGNKFF SMPLK



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Directness:


Physiological Relevance:


Evidence Codes:


Methodology:


Perturbation of System:


Biological System:


Protease Assignment Confidence:


Evidence Names:


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Lab:



Protein Neighborhood

Domains & Features

3 N-termini - 1 C-termini - 0 Cleavages - 0 Substrates

N-termini

C-termini

    Name Sequence Position Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)
    ...SMPLK 265 inferred from electronic annotation electronic annotation UniProtKB inferred from uniprot
    ...SMPLK 265 inferred from isoform by sequence similarity unknown TopFIND inferred from TCt89592

Cleavages

    Protease Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)

Substrates

    Substrate Position Sequence Evidence type Method Source (database) Source (Lab) Evidence name Publications (PMIDs)