Q9BX40: Protein LSM14 homolog B
Protein names | - Protein LSM14 homolog B - Protein FAM61B - RNA-associated protein 55B - hRAP55B |
---|---|
Gene names | LSM14B |
Organism | Homo sapiens |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | Q9BX40 |
8
N-termini
6
C-termini
2
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR
70 80 90 100 110 120
EEIYEYIIFR GSDIKDITVC EPPKAQHTLP QDPAIVQSSL GSASASPFQP HVPYSPFRGM
130 140 150 160 170 180
APYGPLAASS LLSQQYAASL GLGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT
190 200 210 220 230 240
TGTQLNGRQA QPSSKTASDV VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT
250 260 270 280 290 300
NVKENTIKFE GDFDFESANA QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP
310 320 330 340 350 360
AEEDLLGPNC YYDKSKSFFD NISSELKTSS RRTTWAEERK LNTETFGVSG RFLRGRSSRG
370 380
GFRGGRGNGT TRRNPTSHRA GTGRV
Isoforms
- Isoform 2 of Protein LSM14 homolog B - Isoform 3 of Protein LSM14 homolog BSequence View
10 20 30 40 50 60
MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR
70 80 90 100 110 120
EEIYEYIIFR GSDIKDITVC EPPKAQHTLP QDPAIVQSSL GSASASPFQP HVPYSPFRGM
130 140 150 160 170 180
APYGPLAASS LLSQQYAASL GLGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT
190 200 210 220 230 240
TGTQLNGRQA QPSSKTASDV VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT
250 260 270 280 290 300
NVKENTIKFE GDFDFESANA QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP
310 320 330 340 350 360
AEEDLLGPNC YYDKSKSFFD NISSELKTSS RRTTWAEERK LNTETFGVSG RFLRGRSSRG
370 380
GFRGGRGNGT TRRNPTSHRA GTGRV
10 20 30 40 50 60
MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR
70 80 90 100 110 120
EEIYEYIIFR GSDIKDITVC EPPKAQHTLP QDPAIVQSSL GSASASPFQP HVPYSPFRGM
130 140 150 160 170 180
APYGPLAASS LLSQQYAASL GLGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT
190 200 210 220 230 240
TGTQLNGRQA QPSSKTASDV VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT
250 260 270 280 290 300
NVKENTIKFE GDFDFESANA QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP
310 320 330 340 350 360
AEEDLLGPNC YYDKSKSFFD NISSELKTSS RRTTWAEERK LNTETFGVSG RFLRGRSSRG
370 380
GFRGGRGNGT TRRNPTSHRA GTGRV
Protein Neighborhood
Domains & Features
8 N-termini - 6 C-termini - 2 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
Q9BX40-2-unknown | MSGSSG... | 1 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
Q9BX40-1-unknown | MSGSSG... | 1 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt79997 | |||
Q9BX40-2-Acetylation | SGSSGT... | 2 | acetylation- | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | ||
Q9BX40-2-Acetylation | SGSSGT... | 2 | acetylation- | COFRADIC | Gevaert K. | Van Damme P et al.: Complementary positional proteomics for screening substrates... | 20526345 | ||
Q9BX40-2-Acetylation | SGSSGT... | 2 | acetylation- | other | CNRS/ISV | Large_scale_NTA_Human | |||
Q9BX40-2-Acetylation | SGSSGT... | 2 | acetylation- | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt110382 | ||
Q9BX40-35-unknown | NSTVAL... | 35 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC13248 | |||
Q9BX40-35-unknown | NSTVAL... | 35 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt137990 | |||
Q9BX40-120-unknown | MAPYGP... | 120 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt79998 | |||
Q9BX40-120-unknown | MAPYGP... | 120 | inferred from electronic annotation | unknown | Ensembl | inferred from ensembl protein ENSP00000355209 | |||
Q9BX40-120-unknown | MAPYGP... | 120 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt103044 | |||
Q9BX40-145- | GFPSIP... | 145 | Subtiligase Based Positive Selection | Wells | DB_Untreated | 23264352 | |||
Q9BX40-145-unknown | GFPSIP... | 145 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt164930 | |||
Q9BX40-253-unknown | FDFESA... | 253 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC13250 | |||
Q9BX40-253-unknown | FDFESA... | 253 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt146907 | |||
Q9BX40-253-unknown | FDFESA... | 253 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt148557 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...TIDTDN | 34 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC13248 | |||
...TIDTDN | 34 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt121001 | |||
...NTIKFE | 249 | inferred from electronic annotation | unknown | Ensembl | inferred from ensembl protein ENSP00000279069 | |||
...KFEGDF | 252 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC13250 | |||
...KFEGDF | 252 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt130238 | |||
...KFEGDF | 252 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt131931 | |||
...ELDKEF | 270 | inferred from electronic annotation | unknown | Ensembl | inferred from ensembl protein ENSP00000383172 | |||
...SELKTS | 328 | inferred from electronic annotation | unknown | Ensembl | inferred from ensembl protein ENSP00000355209 | |||
...GTGRV | 385 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
...GTGRV | 385 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt75615 |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
GRAB_HUMAN | 34 | DTDN.|.NSTV | inferred from experiment | unknown | MEROPS | Gevaert K | Van Damme P et al.:Analysis of protein processing ... (S01.010) | 18836177, |
GRAB_HUMAN | 252 | EGDF.|.FDFE | inferred from experiment | unknown | MEROPS | Gevaert K | Van Damme P et al.:Complementary positional proteo... (M14.017) | 20526345, |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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