Q9BX40: Protein LSM14 homolog B

General Information

Protein names	- Protein LSM14 homolog B - Protein FAM61B - RNA-associated protein 55B - hRAP55B
Gene names	LSM14B
Organism	Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID	Q9BX40

8 N-termini

6 C-termini

2 Cleavages

0 Substrates

Sequence

Isoforms

- Isoform 2 of Protein LSM14 homolog B - Isoform 3 of Protein LSM14 homolog B

Sequence View

        10         20         30         40         50         60
MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR
        70         80         90        100        110        120
EEIYEYIIFR GSDIKDITVC EPPKAQHTLP QDPAIVQSSL GSASASPFQP HVPYSPFRGM
       130        140        150        160        170        180
APYGPLAASS LLSQQYAASL GLGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT
       190        200        210        220        230        240
TGTQLNGRQA QPSSKTASDV VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT
       250        260        270        280        290        300
NVKENTIKFE GDFDFESANA QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP
       310        320        330        340        350        360
AEEDLLGPNC YYDKSKSFFD NISSELKTSS RRTTWAEERK LNTETFGVSG RFLRGRSSRG
       370        380
GFRGGRGNGT TRRNPTSHRA GTGRV         10         20         30         40         50         60
MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR
        70         80         90        100        110        120
EEIYEYIIFR GSDIKDITVC EPPKAQHTLP QDPAIVQSSL GSASASPFQP HVPYSPFRGM
       130        140        150        160        170        180
APYGPLAASS LLSQQYAASL GLGAGFPSIP VGKSPMVEQA VQTGSADNLN AKKLLPGKGT
       190        200        210        220        230        240
TGTQLNGRQA QPSSKTASDV VQPAAVQAQG QVNDENRRPQ RRRSGNRRTR NRSRGQNRPT
       250        260        270        280        290        300
NVKENTIKFE GDFDFESANA QFNREELDKE FKKKLNFKDD KAEKGEEKDL AVVTQSAEAP
       310        320        330        340        350        360
AEEDLLGPNC YYDKSKSFFD NISSELKTSS RRTTWAEERK LNTETFGVSG RFLRGRSSRG
       370        380
GFRGGRGNGT TRRNPTSHRA GTGRV

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Directness:

Physiological Relevance:

Evidence Codes:

Methodology:

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Biological System:

Protease Assignment Confidence:

Evidence Names:

Database:

Lab:

Protein Neighborhood

Domains & Features

8 N-termini - 6 C-termini - 2 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
Q9BX40-2-unknown	MSGSSG...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9BX40-1-unknown	MSGSSG...	1		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt79997
Q9BX40-2-Acetylation	SGSSGT...	2	acetylation-	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9BX40-2-Acetylation	SGSSGT...	2	acetylation-		COFRADIC		Gevaert K.	Van Damme P et al.: Complementary positional proteomics for screening substrates...	20526345
Q9BX40-2-Acetylation	SGSSGT...	2	acetylation-		other		CNRS/ISV	Large_scale_NTA_Human
Q9BX40-2-Acetylation	SGSSGT...	2	acetylation-	inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt110382
Q9BX40-35-unknown	NSTVAL...	35		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC13248
Q9BX40-35-unknown	NSTVAL...	35		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt137990
Q9BX40-120-unknown	MAPYGP...	120		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt79998
Q9BX40-120-unknown	MAPYGP...	120		inferred from electronic annotation	unknown	Ensembl		inferred from ensembl protein ENSP00000355209
Q9BX40-120-unknown	MAPYGP...	120		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt103044
Q9BX40-145-	GFPSIP...	145			Subtiligase Based Positive Selection		Wells	DB_Untreated	23264352
Q9BX40-145-unknown	GFPSIP...	145		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt164930
Q9BX40-253-unknown	FDFESA...	253		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC13250
Q9BX40-253-unknown	FDFESA...	253		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt146907
Q9BX40-253-unknown	FDFESA...	253		inferred from isoform by sequence similarity	unknown	TopFIND		inferred from TNt148557

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...TIDTDN	34	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC13248
...TIDTDN	34	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt121001
...NTIKFE	249	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSP00000279069
...KFEGDF	252	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC13250
...KFEGDF	252	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt130238
...KFEGDF	252	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt131931
...ELDKEF	270	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSP00000383172
...SELKTS	328	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSP00000355209
...GTGRV	385	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot
...GTGRV	385	inferred from isoform by sequence similarity	unknown	TopFIND	inferred from TCt75615

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
GRAB_HUMAN	34	DTDN.\|.NSTV	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Analysis of protein processing ... (S01.010)	18836177,
GRAB_HUMAN	252	EGDF.\|.FDFE	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Complementary positional proteo... (M14.017)	20526345,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)