TopFIND 4.0

P62314: Small nuclear ribonucleoprotein Sm D1

General Information

Protein names	- Small nuclear ribonucleoprotein Sm D1 - Sm-D1 - Sm-D autoantigen - snRNP core protein D1
Gene names	SNRPD1
Organism	Homo sapiens
Protease Family
Protease ID
Chromosome location
UniProt ID	P62314

4

N-termini

3

C-termini

2

Cleavages

0

Substrates

Sequence

10 20 30 40 50 60
MKLVRFLMKL SHETVTIELK NGTQVHGTIT GVDVSMNTHL KAVKMTLKNR EPVQLETLSI
70 80 90 100 110
RGNNIRYFIL PDSLPLDTLL VDVEPKVKSK KREAVAGRGR GRGRGRGRGR GRGRGGPRR

Isoforms

Sequence View

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Evidence Codes:

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Protease Assignment Confidence:

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Protein Neighborhood

Domains & Features

4 N-termini - 3 C-termini - 2 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
P62314-1-unknown	MKLVRF...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P62314-1-unknown	MKLVRF...	1			COFRADIC		Gevaert K.	Van Damme P et al.: Complementary positional proteomics for screening substrates...	20526345
P62314-27-unknown	GTITGV...	27		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC6118
P62314-45-unknown	MTLKNR...	45		inferred from electronic annotation	unknown	Ensembl		inferred from ensembl protein ENSP00000463568
P62314-73-unknown	SLPLDT...	73		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC11770

C-termini

Name	Sequence	Position	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
	...GTQVHG	26	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC6118
	...FILPDS	72	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC11770
	...GGPRR	119	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
CATL1_HUMAN	26	QVHG.\|.GTIT	inferred from experiment	unknown	MEROPS	Schilling O	Biniossek ML et al.:Proteomic identification of pro... (C01.060)	21967108,
GRAB_HUMAN	72	LPDS.\|.SLPL	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Complementary positional proteo... (M14.017)	20526345,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)