Q9Z1N5: Spliceosome RNA helicase Ddx39b

General Information

Protein names	- Spliceosome RNA helicase Ddx39b - 3.6.4.13 - 56 kDa U2AF65-associated protein - DEAD box protein UAP56 - HLA-B-associated transcript 1 protein
Gene names	Ddx39b
Organism	Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID	Q9Z1N5

8 N-termini

5 C-termini

3 Cleavages

0 Substrates

Sequence

        10         20         30         40         50         60
MAENDVDNEL LDYEDDEVET AAGADGTEAP AKKDVKGSYV SIHSSGFRDF LLKPELLRAI
        70         80         90        100        110        120
VDCGFEHPSE VQHECIPQAI LGMDVLCQAK SGMGKTAVFV LATLQQLEPV TGQVSVLVMC
       130        140        150        160        170        180
HTRELAFQIS KEYERFSKYM PNVKVAVFFG GLSIKKDEEV LKKNCPHIVV GTPGRILALA
       190        200        210        220        230        240
RNKSLNLKHI KHFILDECDK MLEQLDMRRD VQEIFRMTPH EKQVMMFSAT LSKEIRPVCR
       250        260        270        280        290        300
KFMQDPMEIF VDDETKLTLH GLQQYYVKLK DNEKNRKLFD LLDVLEFNQV VIFVKSVQRC
       310        320        330        340        350        360
IALAQLLVEQ NFPAIAIHRG MPQEERLSRY QQFKDFQRRI LVATNLFGRG MDIERVNIAF
       370        380        390        400        410        420
NYDMPEDSDT YLHRVARAGR FGTKGLAITF VSDENDAKIL NDVQDRFEVN ISELPDEIDI

SSYIEQTR

Isoforms

Sequence View

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Protease Assignment Confidence:

Evidence Names:

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Lab:

Protein Neighborhood

Domains & Features

8 N-termini - 5 C-termini - 3 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
Q9Z1N5-2-unknown	MAENDV...	1		inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
Q9Z1N5-2-unknown	MAENDV...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9Z1N5-2-Acetylation	AENDVD...	2	acetylation-	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9Z1N5-2-Acetylation	AENDVD...	2	acetylation-	inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
Q9Z1N5-34-unknown	DVKGSY...	34			N-TAILS		Overall CM.	auf dem Keller U.: A statistics-based platform for quantitative N-terminome...	20305283
Q9Z1N5-37-unknown	GSYVSI...	37			N-TAILS		Overall CM.	auf dem Keller U.: A statistics-based platform for quantitative N-terminome...	20305283
Q9Z1N5-37-unknown	GSYVSI...	37		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9Z1N5-37-unknown	GSYVSI...	37		inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
Q9Z1N5-39-unknown	YVSIHS...	39		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC34405
Q9Z1N5-39-unknown	YVSIHS...	39		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
Q9Z1N5-39-unknown	YVSIHS...	39		inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
Q9Z1N5-83-unknown	MDVLCQ...	83		inferred from electronic annotation	unknown	Ensembl		inferred from ensembl protein ENSMUSP00000133705
Q9Z1N5-361-unknown	NYDMPE...	361		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC34406
Q9Z1N5-388-unknown	ITFVSD...	388		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC34407

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...DVKGSY	38	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC34405
...MFSATL	230	inferred from electronic annotation	unknown	Ensembl	inferred from ensembl protein ENSMUSP00000133705
...VNIAFN	360	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC34406
...TKGLAI	387	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC34407
...IEQTR	428	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
MMP2_MOUSE	38	KGSY.\|.YVSI	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
MMP2_MOUSE	360	IAFN.\|.NYDM	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
MMP2_MOUSE	387	GLAI.\|.ITFV	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)