P34897: Serine hydroxymethyltransferase, mitochondrial
Protein names | - Serine hydroxymethyltransferase, mitochondrial - SHMT - 2.1.2.1 {ECO:0000269|PubMed:24075985, ECO:0000269|PubMed:25619277, ECO:0000269|PubMed:29364879} - Glycine hydroxymethyltransferase - Serine methylase |
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Gene names | SHMT2 |
Organism | Homo sapiens |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | P34897 |
12
N-termini
3
C-termini
1
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MLYFSLFWAA RPLQRCGQLV RMAIRAQHSN AAQTQTGEAN RGWTGQESLS DSDPEMWELL
70 80 90 100 110 120
QREKDRQCRG LELIASENFC SRAALEALGS CLNNKYSEGY PGKRYYGGAE VVDEIELLCQ
130 140 150 160 170 180
RRALEAFDLD PAQWGVNVQP YSGSPANLAV YTALLQPHDR IMGLDLPDGG HLTHGYMSDV
190 200 210 220 230 240
KRISATSIFF ESMPYKLNPK TGLIDYNQLA LTARLFRPRL IIAGTSAYAR LIDYARMREV
250 260 270 280 290 300
CDEVKAHLLA DMAHISGLVA AKVIPSPFKH ADIVTTTTHK TLRGARSGLI FYRKGVKAVD
310 320 330 340 350 360
PKTGREIPYT FEDRINFAVF PSLQGGPHNH AIAAVAVALK QACTPMFREY SLQVLKNARA
370 380 390 400 410 420
MADALLERGY SLVSGGTDNH LVLVDLRPKG LDGARAERVL ELVSITANKN TCPGDRSAIT
430 440 450 460 470 480
PGGLRLGAPA LTSRQFREDD FRRVVDFIDE GVNIGLEVKS KTAKLQDFKS FLLKDSETSQ
490 500
RLANLRQRVE QFARAFPMPG FDEH
Isoforms
- Isoform 2 of Serine hydroxymethyltransferase, mitochondrial - Isoform 3 of Serine hydroxymethyltransferase, mitochondrialSequence View
10 20 30 40 50 60
MLYFSLFWAA RPLQRCGQLV RMAIRAQHSN AAQTQTGEAN RGWTGQESLS DSDPEMWELL
70 80 90 100 110 120
QREKDRQCRG LELIASENFC SRAALEALGS CLNNKYSEGY PGKRYYGGAE VVDEIELLCQ
130 140 150 160 170 180
RRALEAFDLD PAQWGVNVQP YSGSPANLAV YTALLQPHDR IMGLDLPDGG HLTHGYMSDV
190 200 210 220 230 240
KRISATSIFF ESMPYKLNPK TGLIDYNQLA LTARLFRPRL IIAGTSAYAR LIDYARMREV
250 260 270 280 290 300
CDEVKAHLLA DMAHISGLVA AKVIPSPFKH ADIVTTTTHK TLRGARSGLI FYRKGVKAVD
310 320 330 340 350 360
PKTGREIPYT FEDRINFAVF PSLQGGPHNH AIAAVAVALK QACTPMFREY SLQVLKNARA
370 380 390 400 410 420
MADALLERGY SLVSGGTDNH LVLVDLRPKG LDGARAERVL ELVSITANKN TCPGDRSAIT
430 440 450 460 470 480
PGGLRLGAPA LTSRQFREDD FRRVVDFIDE GVNIGLEVKS KTAKLQDFKS FLLKDSETSQ
490 500
RLANLRQRVE QFARAFPMPG FDEH
10 20 30 40 50 60
MLYFSLFWAA RPLQRCGQLV RMAIRAQHSN AAQTQTGEAN RGWTGQESLS DSDPEMWELL
70 80 90 100 110 120
QREKDRQCRG LELIASENFC SRAALEALGS CLNNKYSEGY PGKRYYGGAE VVDEIELLCQ
130 140 150 160 170 180
RRALEAFDLD PAQWGVNVQP YSGSPANLAV YTALLQPHDR IMGLDLPDGG HLTHGYMSDV
190 200 210 220 230 240
KRISATSIFF ESMPYKLNPK TGLIDYNQLA LTARLFRPRL IIAGTSAYAR LIDYARMREV
250 260 270 280 290 300
CDEVKAHLLA DMAHISGLVA AKVIPSPFKH ADIVTTTTHK TLRGARSGLI FYRKGVKAVD
310 320 330 340 350 360
PKTGREIPYT FEDRINFAVF PSLQGGPHNH AIAAVAVALK QACTPMFREY SLQVLKNARA
370 380 390 400 410 420
MADALLERGY SLVSGGTDNH LVLVDLRPKG LDGARAERVL ELVSITANKN TCPGDRSAIT
430 440 450 460 470 480
PGGLRLGAPA LTSRQFREDD FRRVVDFIDE GVNIGLEVKS KTAKLQDFKS FLLKDSETSQ
490 500
RLANLRQRVE QFARAFPMPG FDEH
Protein Neighborhood
Domains & Features
12 N-termini - 3 C-termini - 1 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
P34897-1-unknown | MLYFSL... | 1 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt76123 | |||
P34897-22-unknown | MAIRAQ... | 22 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt76124 | |||
P34897-22-unknown | MAIRAQ... | 22 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt101094 | |||
P34897-27-unknown | QHSNAA... | 27 | unknown | Mahrus S. et al.: nonapototic Jurkat cells, Global Sequencing of Proteolytic Cleavage... | 18722006 | ||||
P34897-27-unknown | QHSNAA... | 27 | unknown | Mahrus S. et al.: apototic Jurkat cells, Global Sequencing of Proteolytic Cleavage... | 18722006 | ||||
P34897-27-unknown | QHSNAA... | 27 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt159674 | |||
P34897-27-unknown | QHSNAA... | 27 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt159675 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | DB_Untreated | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_DB_Doxo | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_bortezomib | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_Etoposide | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apopotic_Jurkat_FasL | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | Jurkat_untreated | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_staurotrail | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1s_bort | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | MM1SDBJurkat_Untreated | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1SDBJurkat_Mix | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptotic_RPMI_Dox | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | RMPI_untreated | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | THP_untreated | 23264352 | |||
P34897-27- | QHSNAA... | 27 | Subtiligase Based Positive Selection | Wells | apoptosis_U266_bortezomib_induced | 23264352 | |||
P34897-28-unknown | HSNAAQ... | 28 | unknown | Mahrus S. et al.: apototic Jurkat cells, Global Sequencing of Proteolytic Cleavage... | 18722006 | ||||
P34897-28-unknown | HSNAAQ... | 28 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt161602 | |||
P34897-28-unknown | HSNAAQ... | 28 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt161603 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | DB_Untreated | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | apoptotic_DB_Doxo | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_Etoposide | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | apopotic_Jurkat_FasL | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | Jurkat_untreated | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_staurotrail | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | apoptotic_RPMI_Dox | 23264352 | |||
P34897-28- | HSNAAQ... | 28 | Subtiligase Based Positive Selection | Wells | RMPI_untreated | 23264352 | |||
P34897-30-unknown | NAAQTQ... | 30 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
P34897-30-unknown | NAAQTQ... | 30 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt114775 | |||
P34897-30-unknown | NAAQTQ... | 30 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt114776 | |||
P34897-31-unknown | AAQTQT... | 31 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt164335 | |||
P34897-31-unknown | AAQTQT... | 31 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt164336 | |||
P34897-31- | AAQTQT... | 31 | Subtiligase Based Positive Selection | Wells | DB_Untreated | 23264352 | |||
P34897-31- | AAQTQT... | 31 | Subtiligase Based Positive Selection | Wells | apoptotic_DB_Doxo | 23264352 | |||
P34897-31- | AAQTQT... | 31 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1s_bort | 23264352 | |||
P34897-349-unknown | EYSLQV... | 349 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC14087 | |||
P34897-349-unknown | EYSLQV... | 349 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt150472 | |||
P34897-349-unknown | EYSLQV... | 349 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt150694 | |||
P34897-470- | SFLLKD... | 470 | Subtiligase Based Positive Selection | Wells | Jurkat_untreated | 23264352 | |||
P34897-470-unknown | SFLLKD... | 470 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt169732 | |||
P34897-470-unknown | SFLLKD... | 470 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt169733 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...TPMFRE | 348 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC14087 | |||
...TPMFRE | 348 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt133867 | |||
...TPMFRE | 348 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt134092 | |||
...GFDEH | 504 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
...GFDEH | 504 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt71742 | |||
...GFDEH | 504 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt71741 | |||
...GFDEH | 504 | COFRADIC | Gevaert K. | Van Damme P et al.: PC3-cells, Complementary positional proteomics for screening substrates... | 20526345, | |||
...GFDEH | 504 | COFRADIC | Gevaert K. | Van Damme P et al.: PC3-cells, Complementary positional proteomics for screening substrates... | 20526345, |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
GRAM_HUMAN | 348 | MFRE.|.EYSL | inferred from experiment | unknown | MEROPS | Bovenschen N | de Poot SA et al.:Human and mouse granzyme M disp... (S01.139) | 21564021, |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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