O00148: ATP-dependent RNA helicase DDX39A
Protein names | - ATP-dependent RNA helicase DDX39A - 3.6.4.13 - DEAD box protein 39 - Nuclear RNA helicase URH49 |
---|---|
Gene names | DDX39A |
Organism | Homo sapiens |
Protease Family | |
Protease ID | |
Chromosome location | |
UniProt ID | O00148 |
12
N-termini
3
C-termini
2
Cleavages
0
Substrates
Sequence
10 20 30 40 50 60
MAEQDVENDL LDYDEEEEPQ APQESTPAPP KKDIKGSYVS IHSSGFRDFL LKPELLRAIV
70 80 90 100 110 120
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVTVLVMCH
130 140 150 160 170 180
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEEVL KKNCPHVVVG TPGRILALVR
190 200 210 220 230 240
NRSFSLKNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKDIRPVCRK
250 260 270 280 290 300
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVI IFVKSVQRCM
310 320 330 340 350 360
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN
370 380 390 400 410 420
YDMPEDSDTY LHRVARAGRF GTKGLAITFV SDENDAKILN DVQDRFEVNV AELPEEIDIS
TYIEQSR
Isoforms
- Isoform 2 of ATP-dependent RNA helicase DDX39A - Isoform 3 of ATP-dependent RNA helicase DDX39ASequence View
10 20 30 40 50 60
MAEQDVENDL LDYDEEEEPQ APQESTPAPP KKDIKGSYVS IHSSGFRDFL LKPELLRAIV
70 80 90 100 110 120
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVTVLVMCH
130 140 150 160 170 180
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEEVL KKNCPHVVVG TPGRILALVR
190 200 210 220 230 240
NRSFSLKNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKDIRPVCRK
250 260 270 280 290 300
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVI IFVKSVQRCM
310 320 330 340 350 360
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN
370 380 390 400 410 420
YDMPEDSDTY LHRVARAGRF GTKGLAITFV SDENDAKILN DVQDRFEVNV AELPEEIDIS
TYIEQSR
10 20 30 40 50 60
MAEQDVENDL LDYDEEEEPQ APQESTPAPP KKDIKGSYVS IHSSGFRDFL LKPELLRAIV
70 80 90 100 110 120
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVTVLVMCH
130 140 150 160 170 180
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEEVL KKNCPHVVVG TPGRILALVR
190 200 210 220 230 240
NRSFSLKNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKDIRPVCRK
250 260 270 280 290 300
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVI IFVKSVQRCM
310 320 330 340 350 360
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN
370 380 390 400 410 420
YDMPEDSDTY LHRVARAGRF GTKGLAITFV SDENDAKILN DVQDRFEVNV AELPEEIDIS
TYIEQSR
Protein Neighborhood
Domains & Features
12 N-termini - 3 C-termini - 2 Cleavages - 0 Substrates
N-termini
Name | Sequence | Position | Modification | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMID) |
---|---|---|---|---|---|---|---|---|---|
O00148-1-unknown | MAEQDV... | 1 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt73377 | |||
O00148-2-unknown | MAEQDV... | 1 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | |||
O00148-2-Acetylation | AEQDVE... | 2 | acetylation- | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot | ||
O00148-2-Acetylation | AEQDVE... | 2 | acetylation- | other | CNRS/ISV | Large_scale_NTA_Human | |||
O00148-2-Acetylation | AEQDVE... | 2 | acetylation- | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt111320 | ||
O00148-10-unknown | LLDYDE... | 10 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt174008 | |||
O00148-10- | LLDYDE... | 10 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_staurotrail | 23264352 | |||
O00148-10- | LLDYDE... | 10 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1s_bort | 23264352 | |||
O00148-10- | LLDYDE... | 10 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1SDBJurkat_Mix | 23264352 | |||
O00148-13- | YDEEEE... | 13 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1s_bort | 23264352 | |||
O00148-13-unknown | YDEEEE... | 13 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt175247 | |||
O00148-25-unknown | STPAPP... | 25 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC6979 | |||
O00148-25-unknown | STPAPP... | 25 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt137175 | |||
O00148-48-unknown | DFLLKP... | 48 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC9874 | |||
O00148-48-unknown | DFLLKP... | 48 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt139018 | |||
O00148-135-unknown | FSKYMP... | 135 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TNt164979 | |||
O00148-135- | FSKYMP... | 135 | Subtiligase Based Positive Selection | Wells | DB_Untreated | 23264352 | |||
O00148-360- | NYDMPE... | 360 | Subtiligase Based Positive Selection | Wells | apoptotic_Jurkat_staurotrail | 23264352 | |||
O00148-360- | NYDMPE... | 360 | Subtiligase Based Positive Selection | Wells | apoptotic_MM1SDBJurkat_Mix | 23264352 |
C-termini
Name | Sequence | Position | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
...QAPQES | 24 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC6979 | |||
...QAPQES | 24 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt120086 | |||
...SSGFRD | 47 | inferred from cleavage | unknown | TopFIND | Inferred from cleavage TC9874 | |||
...SSGFRD | 47 | inferred from isoform by sequence similarity | unknown | TopFIND | inferred from TCt122087 | |||
...IEQSR | 427 | inferred from electronic annotation | electronic annotation | UniProtKB | inferred from uniprot |
Cleavages
Protease | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
---|---|---|---|---|---|---|---|---|
CATS_HUMAN | 24 | PQES.|.STPA | inferred from experiment | unknown | MEROPS | Schilling O | Biniossek ML et al.:Proteomic identification of pro... (C01.060) | 21967108, |
GRAA_HUMAN | 47 | GFRD.|.DFLL | inferred from experiment | unknown | MEROPS | Gevaert K | Van Damme P et al.:The substrate specificity profi... (S01.135) | 20536382, |
Substrates
Substrate | Position | Sequence | Evidence type | Method | Source (database) | Source (Lab) | Evidence name | Publications (PMIDs) |
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