P62960: Nuclease-sensitive element-binding protein 1

General Information

Protein names	- Nuclease-sensitive element-binding protein 1 - CCAAT-binding transcription factor I subunit A - CBF-A - DNA-binding protein B - DBPB - Enhancer factor I subunit A - EFI-A - Y-box transcription factor - Y-box-binding protein 1 - YB-1
Gene names	Ybx1
Organism	Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID	P62960

12 N-termini

9 C-termini

9 Cleavages

0 Substrates

Sequence

        10         20         30         40         50         60
MSSEAETQQP PAAPAAALSA ADTKPGSTGS GAGSGGPGGL TSAAPAGGDK KVIATKVLGT
        70         80         90        100        110        120
VKWFNVRNGY GFINRNDTKE DVFVHQTAIK KNNPRKYLRS VGDGETVEFD VVEGEKGAEA
       130        140        150        160        170        180
ANVTGPGGVP VQGSKYAADR NHYRRYPRRR GPPRNYQQNY QNSESGEKNE GSESAPEGQA
       190        200        210        220        230        240
QQRRPYRRRR FPPYYMRRPY ARRPQYSNPP VQGEVMEGAD NQGAGEQGRP VRQNMYRGYR
       250        260        270        280        290        300
PRFRRGPPRQ RQPREDGNEE DKENQGDETQ GQQPPQRRYR RNFNYRRRRP ENPKPQDGKE
       310        320
TKAADPPAEN SSAPEAEQGG AE

Isoforms

Sequence View

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Directness:

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Evidence Codes:

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Protease Assignment Confidence:

Evidence Names:

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Protein Neighborhood

Domains & Features

12 N-termini - 9 C-termini - 9 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Modification	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
P62960-2-unknown	MSSEAE...	1		inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
P62960-2-unknown	MSSEAE...	1		inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P62960-2-Acetylation	SSEAET...	2	acetylation-	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P62960-2-Acetylation	SSEAET...	2	acetylation-	inferred from similarity	unknown	UniProtKB		inferred from uniprot (by similarity)
P62960-57-unknown	VLGTVK...	57		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33709
P62960-110-unknown	DVVEGE...	110		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC30215
P62960-110-unknown	DVVEGE...	110		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC29007
P62960-113-unknown	EGEKGA...	113		inferred from electronic annotation	unknown	Ensembl		inferred from ensembl protein ENSMUSP00000117225
P62960-156-unknown	YQQNYQ...	156		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33710
P62960-160-unknown	YQNSES...	160		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33711
P62960-163-unknown	SESGEK...	163		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33712
P62960-203-unknown	RPQYSN...	203		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33713
P62960-215-unknown	VMEGAD...	215		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC32373
P62960-257-unknown	GNEEDK...	257		inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC32374
P62960-267-unknown	DETQGQ...	267			N-TAILS		Overall CM.	auf dem Keller U.: A statistics-based platform for quantitative N-terminome...	20305283

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...VIATKV	56	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33709
...ETVEFD	109	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC30215
...ETVEFD	109	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC29007
...GPPRNY	155	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33710
...NYQQNY	159	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33711
...QNYQNS	162	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33712
...RPYARR	202	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33713
...PVQGEV	214	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC32373
...QPREDG	256	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC32374
...QGGAE	322	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
MMP2_MOUSE	56	ATKV.\|.VLGT	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
CATE_MOUSE	109	VEFD.\|.DVVE	inferred from experiment	unknown	MEROPS		Merops CATE_MOUSE -> YBOX1_MOUSE @109
CATD_MOUSE	109	VEFD.\|.DVVE	inferred from experiment	unknown	MEROPS		Merops CATD_MOUSE -> YBOX1_MOUSE @109
MMP2_MOUSE	155	PRNY.\|.YQQN	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
MMP2_MOUSE	159	QQNY.\|.YQNS	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
MMP2_MOUSE	162	YQNS.\|.SESG	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
MMP2_MOUSE	202	YARR.\|.RPQY	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
GRAB_MOUSE	214	QGEV.\|.VMEG	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Analysis of protein processing ... (S01.010)	18836177,
GRAB_MOUSE	256	REDG.\|.GNEE	inferred from experiment	unknown	MEROPS	Gevaert K	Van Damme P et al.:Analysis of protein processing ... (S01.010)	18836177,

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)