P27048: Small nuclear ribonucleoprotein-associated protein B

General Information

Protein names	- Small nuclear ribonucleoprotein-associated protein B - snRNP-B - snRPB - Sm protein B - Sm-B - SmB
Gene names	Snrpb
Organism	Mus musculus
Protease Family
Protease ID
Chromosome location
UniProt ID	P27048

8 N-termini

5 C-termini

5 Cleavages

0 Substrates

Sequence

        10         20         30         40         50         60
MTVGKSSKML QHIDYRMRCI LQDGRIFIGT FKAFDKHMNL ILCDCDEFRK IKPKNSKQAE
        70         80         90        100        110        120
REEKRVLGLV LLRGENLVSM TVEGPPPKDT GIARVPLAGA AGGPGIGRAA GRGIPAGVPM
       130        140        150        160        170        180
PQAPAGLAGP VRGVGGPSQQ VMTPQGRGTV AAAAAAATAS IAGAPTQYPP GRGGPPPPMG
       190        200        210        220        230
RGAPPPGMMG PPPGMRPPMG PPMGLPPGRG TPMGMPPPGM RPPPPGMRGL L

Isoforms

Sequence View

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Protease Assignment Confidence:

Evidence Names:

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Lab:

Protein Neighborhood

Domains & Features

8 N-termini - 5 C-termini - 5 Cleavages - 0 Substrates

N-termini

Name	Sequence	Position	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMID)
P27048-1-unknown	MTVGKS...	1	inferred from electronic annotation	electronic annotation	UniProtKB		inferred from uniprot
P27048-2-unknown	TVGKSS...	2		N-TAILS		Overall CM.	auf dem Keller U.: A statistics-based platform for quantitative N-terminome...	20305283
P27048-2-unmodified	TVGKSS...	2		N-TAILS		Overall CM.	Kleifeldt O. et al.: Isotopic labeling of terminal amines in complex samples identifies...	20208520
P27048-5-unknown	KSSKML...	5	inferred from electronic annotation	unknown	TISdb		inferred from TISdb
P27048-74-unknown	RGENLV...	73	inferred from electronic annotation	unknown	TISdb		inferred from TISdb
P27048-74-unknown	RGENLV...	73	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28355
P27048-77-unknown	LVSMTV...	77	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC33497
P27048-78-unknown	VSMTVE...	78	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28847
P27048-78-unknown	VSMTVE...	78	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC29888
P27048-80-unknown	MTVEGP...	80	inferred from cleavage	unknown	TopFIND		Inferred from cleavage TC28848

C-termini

Sequence	Position	Evidence type	Method	Source (database)	Evidence name
...LVLLRG	73	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC28355
...LRGENL	76	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC33497
...RGENLV	77	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC28847
...RGENLV	77	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC29888
...ENLVSM	79	inferred from cleavage	unknown	TopFIND	Inferred from cleavage TC28848
...MRGLL	231	inferred from electronic annotation	electronic annotation	UniProtKB	inferred from uniprot

Cleavages

Protease	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)
CASP1_MOUSE	73	LLRG.\|.GENL	inferred from experiment	unknown	MEROPS	Nunez G	Lamkanfi M et al.:Targeted peptidecentric proteom... (C14.001)	18667412,
MMP2_MOUSE	76	GENL.\|.LVSM	inferred from experiment	unknown	MEROPS	Overall CM	auf dem Keller U et al.:A statistics-based platform for... (M10.003)	20305283,
CATD_MOUSE	77	ENLV.\|.VSMT	inferred from experiment	unknown	MEROPS		Merops CATD_MOUSE -> RSMB_MOUSE @77
CATE_MOUSE	77	ENLV.\|.VSMT	inferred from experiment	unknown	MEROPS		Merops CATE_MOUSE -> RSMB_MOUSE @77
CATD_MOUSE	79	LVSM.\|.MTVE	inferred from experiment	unknown	MEROPS		Merops CATD_MOUSE -> RSMB_MOUSE @79

Substrates

Substrate	Position	Sequence	Evidence type	Method	Source (database)	Source (Lab)	Evidence name	Publications (PMIDs)